class II, major histocompatibility complex, transactivator (CIITA) - 2511 nt intron 05 reference sequence

(intronic numbering for coding DNA Reference Sequence)


         .         .         .         .         .         .  g.22865
gtgagtgagcccctccctgatccaacctagccttgcttgagacctggcctttccttgact  c.436+60

         .         .         .         .         .         .  g.22925
ccaaagcctgctgtgggtccaacttgcttccctcgctaagtcctgtctggttgggaggcc  c.436+120

         .         .         .         .         .         .  g.22985
ctttaaaagccaacaggagccttaaaatgtacatctgattatttcatggccctgataacc  c.436+180

         .         .         .         .         .         .  g.23045
ctccaatggctacaaaatacatgccacaaggcctgtatggcccttcctccctctccaaac  c.436+240

         .         .         .         .         .         .  g.23105
ccactatgagacaccacacttcagccaccaccagcttctccactcctataacccatgtgc  c.436+300

         .         .         .         .         .         .  g.23165
cctttcaagcctcggggcctttgcagttgctatagtctctatctggaatgcccttccccc  c.436+360

         .         .         .         .         .         .  g.23225
agttcttcccatggctgactcctttgaatctttctggtgttggctaaactgtcacctctt  c.436+420

         .         .         .         .         .         .  g.23285
cctggaacccttctctgaccatccttccatgtagattagctcagttattctcaccttgtg  c.436+480

         .         .         .         .         .         .  g.23345
tgtctttttccttgcagtttagcactcattaccatctggacatattttacgccttgctct  c.436+540

         .         .         .         .         .         .  g.23405
cccactgtgaggacagggaccttgtctttcttgctcgtgactgtttccccagcatctagt  c.436+600

         .         .         .         .         .         .  g.23465
gcagtgcctggtatgcagtagcacctcagtagatatctgttgaatgaaaacatctgtaaa  c.436+660

         .         .         .         .         .         .  g.23525
atgggtgtaacagttaactgagtacttattatgggtctgaccatgtgtaagtcctgtatc  c.436+720

         .         .         .         .         .         .  g.23585
tatttattcagttcttaaacaggtgaatcgcacacagggtatgagattttaaaagtgcaa  c.436+780

         .         .         .         .         .         .  g.23645
agaatattcagtgaaggctgggcgcagcggctcacacctgtaatcccagcagtttgggag  c.436+840

         .         .         .         .         .         .  g.23705
gccaagggggacggatcacttgaggtcaggagtttgatacctgcctggccaacatggtga  c.436+900

         .         .         .         .         .         .  g.23765
aaccgcgtctctaccaaaaaatacaaaaattagccgggtgtggtggtgcacgcctgtaat  c.436+960

         .         .         .         .         .         .  g.23825
cccagctactcgggaggctgaggcaggagaatcgcttgaacccaggaggtggaggttgca  c.436+1020

         .         .         .         .         .         .  g.23885
gtgagctaagatcacgccactgcactccagcctgggtggcagagtaagactctgtctcaa  c.436+1080

         .         .         .         .         .         .  g.23945
acaacaacaaccaaaagaatattcagtgaaaaaaaaatctccctcccactcctgttctgt  c.436+1140

         .         .         .         .         .         .  g.24005
agtccctcagttttgctcctatcttagtcaacctatgtgaccagcttcctttttgccttg  c.436+1200

         .         .         .         .         .        g.24061
tcagaaataaagcgagctcctgtatttgctttaattttccatgcaaatgaccacat  c.436+1256

--------------------- middle of intron ---------------------
          .         .         .         .         .           g.24116
     tttatttacactattctgcattttgctttcttcatttacttcattactccctgtc  c.437-1201

.         .         .         .         .         .           g.24176
tgggaggtcacgttccatattattgagggagaggacacggtcctatcttcagcagcttct  c.437-1141

.         .         .         .         .         .           g.24236
ttattttctttcttttcttgtttttcttctttatgttttcatttgataaatatttccccc  c.437-1081

.         .         .         .         .         .           g.24296
caagattttattgtgaaagttttcggccaggcgtggtggctcacatctgtaatcccagca  c.437-1021

.         .         .         .         .         .           g.24356
ctttgggaggccaaggctggcagatcacctgaggtcaagagtttgagaccagcctggcca  c.437-961

.         .         .         .         .         .           g.24416
acatggtgaaaccccatctctactaaaaatacaaaaattagccaggcgtggtggcgaaca  c.437-901

.         .         .         .         .         .           g.24476
cctgtaatcccagctaccagggaggctagggtgggagaatcgcttgaacctaagaagcag  c.437-841

.         .         .         .         .         .           g.24536
aggttgcagtgagccaagattgcgccagtgcactccagcctgggcaacagagctagactc  c.437-781

.         .         .         .         .         .           g.24596
tgtttcaaaaaaaaaaaaaaatgttttcaagatacaataaaagtgaaagaatggtactat  c.437-721

.         .         .         .         .         .           g.24656
gaaggtccatatacccaccatgtaccattttgattctacaattaatgttgggttttattc  c.437-661

.         .         .         .         .         .           g.24716
atcttatcacatctctattcatctgtccatccctctatccatccacacacccattcatta  c.437-601

.         .         .         .         .         .           g.24776
tatttttggtacatttcaatgtacatttcaaatgtaaattgcagatttacactcccctcg  c.437-541

.         .         .         .         .         .           g.24836
tgtacttcagcatcctttcttttaaggccatgcagtgtttcgttgggtagatgaaccata  c.437-481

.         .         .         .         .         .           g.24896
atttgtttaagcagtcccttgctaagggacacgtgggtttttaatctgttgctgtgagtg  c.437-421

.         .         .         .         .         .           g.24956
cttgatactcactcactgatttctggcatactcctgcaatgtaggaaccaccacccccat  c.437-361

.         .         .         .         .         .           g.25016
ttcatagatgtgagatcaaaggttcagagaagctgcattgcaaaggcacacagctaggaa  c.437-301

.         .         .         .         .         .           g.25076
gcggttcaaaagcaggttcctttgttttgttttgttttgttttttggctcaaacccatgt  c.437-241

.         .         .         .         .         .           g.25136
tgtgtccccatttgtgactcggcctcttctgctgctacactgcctggtatggtttgagat  c.437-181

.         .         .         .         .         .           g.25196
ggggtttgggttcaagccaaggagctggggttggaatgttagagcgaggggaggaaaatg  c.437-121

.         .         .         .         .         .           g.25256
gacccccaagaccactacccagccttgaagttaaggccgtatagcctgctagagtcctga  c.437-61

.         .         .         .         .         .           g.25316
gccccttctggcttgggacatcctctccctggggcagctgatcacatgttttctctgcag  c.437-1


Powered by LOVD v.2.0 Build 34
©2004-2014 Leiden University Medical Center