(used for mutation description)
(last modified May 2, 2014)
This file was created to facilitate the description of sequence variants in the ORAI1 gene based on a coding DNA reference sequence following the HGVS recommendations.
The sequence was taken from NC_000012.11, covering ORAI1 transcript NM_032790.3.(upstream sequence) . g.1013 gccgcccgggggc c.-181 . . . . . . g.1073 ttttgccagcggcgccgcgggcctgcgtgctggggcagcgggcacttcttcgacctcgtc c.-121 . . . . . . g.1133 ctcctcgtcctgtgcggccggccgggtgaggccgggcccgcgtagggggcagtcggcggc c.-61 . . . . . . g.1193 tgcctccggcggaggtgcctcgcggcgcccgggccggcccgcgcctcggcggcgtgctcc c.-1 . . . . . . g.1253 ATGCATCCGGAGCCCGCCCCGCCCCCGAGCCGCAGCAGTCCCGAGCTTCCCCCAAGCGGC c.60 M H P E P A P P P S R S S P E L P P S G p.20 . . . . . . g.1313 GGCAGCACCACCAGCGGCAGCCGCCGGAGCCGCCGCCGCAGCGGGGACGGGGAGCCCCCG c.120 G S T T S G S R R S R R R S G D G E P P p.40 . . . . . . g.1373 GGGGCCCCGCCACCGCCACCGCCGCCGTCCGCCGTCACCTACCCGGACTGGATCGGCCAG c.180 G A P P P P P P P S A V T Y P D W I G Q p.60 . . . . . . g.1433 AGTTACTCCGAGGTGATGAGCCTCAACGAGCACTCCATGCAGGCGCTGTCCTGGCGCAAG c.240 S Y S E V M S L N E H S M Q A L S W R K p.80 . . . . . . g.1493 CTCTACTTGAGCCGCGCCAAGCTTAAAGCCTCCAGCCGGACCTCGGCTCTGCTCTCCGGC c.300 L Y L S R A K L K A S S R T S A L L S G p.100 | 02 . . . . . g.15543 TTCGCCATG | GTGGCAATGGTGGAGGTGCAGCTGGACGCTGACCACGACTACCCACCGGGG c.360 F A M | V A M V E V Q L D A D H D Y P P G p.120 . . . . . . g.15603 CTGCTCATCGCCTTCAGTGCCTGCACCACAGTGCTGGTGGCTGTGCACCTGTTTGCGCTC c.420 L L I A F S A C T T V L V A V H L F A L p.140 . . . . . . g.15663 ATGATCAGCACCTGCATCCTGCCCAACATCGAGGCGGTGAGCAACGTGCACAATCTCAAC c.480 M I S T C I L P N I E A V S N V H N L N p.160 . . . . . . g.15723 TCGGTCAAGGAGTCCCCCCATGAGCGCATGCACCGCCACATCGAGCTGGCCTGGGCCTTC c.540 S V K E S P H E R M H R H I E L A W A F p.180 . . . . . . g.15783 TCCACCGTCATCGGCACGCTGCTCTTCCTAGCTGAGGTGGTGCTGCTCTGCTGGGTCAAG c.600 S T V I G T L L F L A E V V L L C W V K p.200 . . . . . . g.15843 TTCTTGCCCCTCAAGAAGCAGCCAGGCCAGCCAAGGCCCACCAGCAAGCCCCCCGCCAGT c.660 F L P L K K Q P G Q P R P T S K P P A S p.220 . . . . . . g.15903 GGCGCAGCAGCCAACGTCAGCACCAGCGGCATCACCCCGGGCCAGGCAGCTGCCATCGCC c.720 G A A A N V S T S G I T P G Q A A A I A p.240 . . . . . . g.15963 TCGACCACCATCATGGTGCCCTTCGGCCTGATCTTTATCGTCTTCGCCGTCCACTTCTAC c.780 S T T I M V P F G L I F I V F A V H F Y p.260 . . . . . . g.16023 CGCTCACTGGTTAGCCATAAGACTGACCGACAGTTCCAGGAGCTCAACGAGCTGGCGGAG c.840 R S L V S H K T D R Q F Q E L N E L A E p.280 . . . . . . g.16083 TTTGCCCGCTTACAGGACCAGCTGGACCACAGAGGGGACCACCCCCTGACGCCCGGCAGC c.900 F A R L Q D Q L D H R G D H P L T P G S p.300 . g.16095 CACTATGCCTAG c.912 H Y A X p.303 . . . . . . g.16155 gcccatgtggtctgggcccttccagtgctttggccttacgcccttccccttgaccttgtc c.*60 . . . . . . g.16215 ctgccccagcctcacggacagcctgcgcagggggctgggcttcagcaaggggcagagcat c.*120 . . . . . . g.16275 ggagggaagaggatttttataagagaaatttctgcactttgaaactgtcctctaagagaa c.*180 . . . . . . g.16335 taagcatttcctgttcttccagctccaggtccacctcctgttgggaggcggtggggggcc c.*240 . . . . . . g.16395 aaagtggggccacacactcgctgtgtcccctctcctcccctgtgccagtgccacctgggt c.*300 . . . . . . g.16455 gcctcctcctgtcctgtccgtctcaacctccctcccgtccagcattgagtgtgtacatgt c.*360 . . . g.16492 gtgtgtgacacataaatatactcataaggacacctcc c.*397 (downstream sequence)Legend:
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