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PND10 NKX2.1, FOXF1, and ACTA2 Confocal Imaging

PND10 NKX2.1, FOXF1, and ACTA2 Confocal Imaging

Immunofluorescence-  NKX2.1, FOXF1 and ACTA2

 

Purpose:  Stain slides of 7µm frozen sections of C57BL/6J PND10 mouse lung  for NKX2.1, FOXF1 and ACTA2 with antigen retrieval.

Day 1

  1. For Frozen tissue, rinse 2X in PBS, then 5 min in 4% PFA/PBS, then rinse 1X in PBS.
  2. Briefly equilibrate slides in Antigen Retrieval Buffer.
  3. Antigen retrieval, pH 6.0 (times will vary according to microwave).
  4. 10 mM sodium citrate, pH 6.0, and heat in a microwave at 96oC. *We usually do a series of three runs (6-7 minutes each run) to equal the time/temp because of evaporation (refill coplin jars with dH2O).
  5. Microwave according to instructions on microwave.
  6. Cool on countertop, 15 min.
  7. Rinse with dH2O
  8. 1X PBS, 5 min.
  9. Block in 4% Donkey serum/PBS-T, 2 hours at RT.
  10. For rabbit anti- NKX2.1 (RB TTF-1 1231, Lot# 0912A) dilute 1:1000, For goat anti- FOXF1 dilute 1:100, for mouse anti-ACTA2 (α Smooth muscle actin, A5228, Sigma) dilute 1:2000 in blocking buffer. Spin down in µfuge for 10 minutes and incubate on tissue overnight @ 4oC.

Day 2

  1. Rinse slides in PBS-T 3X, 5 min.
  2. Apply secondary antibody Apply secondary antibody , Donkey Alexa Fluor 488 anti-rabbit IgG (A21206, Lot# 1608521, for anti- NKX2.1), Donkey Alexa Fluor 568 anti-goat IgG (A11057, Lot# 1485187, for anti-FOXF1), Donkey Alexa Fluor 647 anti-mouse IgG (A31571, Lot# 1549801, anti-ACTA2) at 1:200, in blocking buffer. Spin down in µfuge for 10 min, apply to tissue and incubated at room temperature for 1 hour.
  3. Rinse in PBS-T 3X, 5 min.
  4. Dilute DAPI 1:2000 and apply to slides for 10 min.
  5. Wash in PBS-T 3X, 5 min.
  6. Rinse slides in 0.1M PB or TB, 3X, 5 min.
  7. Add 1 drop of Prolong Gold anti-fade mounting medium (P36930).
  8. Coverslip with Gold Seal Coverslip (Cat# 3422 Electron Microscopy Sciences, 22 X 22 mm).
  9. Allow Prolong Gold to cure overnight at room temp in light sealed box.
  1. Store slides in light sealed box @ 4oC

Tissue Used:   

LMM.16.92A.6L.57

PND10 C57BL6          

Gender: Male

Weight= 4.1g

 

Appendix

 

Antigen Retrieval Solution

18ml Solution A- 0.1M Citric Acid (Sigma, C1909) pH 2.5

82ml Reagent B- 0.1M Sodium Citrate (Sigma, S4641 ) pH 8.2

1L dH2O

pH 6.0

Related Experiments

By |2018-08-14T19:14:59+00:00February 23rd, 2018|Categories: Mus musculus, P10|Tags: , , |0 Comments
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Postnatal Day 10 C57BL6 SOX9, NKX2.1, and ACTA2 Confocal Imaging

Postnatal Day 10 C57BL6 SOX9, NKX2.1, and ACTA2 Confocal Imaging

Immunofluorescence- SOX9, NKX2.1 and ACTA2

 

Purpose:  Immunofluorescence on slides of 7µm frozen sections of C57BL6 PND10 lungs for SOX9, NKX2.1 and ACTA2 with antigen retrieval.

Day 1

  1. For Frozen tissue, rinse 2X in PBS, then 5 min in 4% PFA/PBS, then rinse 1X in PBS.
  2. Briefly equilibrate slides in Antigen Retrieval Buffer.
  3. Antigen retrieval, pH 6.0 (times will vary according to microwave).
  4. 10 mM sodium citrate, pH 6.0, and heat in a microwave at 96oC. *We usually do a series of three runs (6-7 minutes each run) to equal the time/temp because of evaporation (refill coplin jars with dH2O).
  5. Microwave according to instructions on microwave.
  6. Cool on countertop, 15 min.
  7. Rinse with dH2O
  8. 1X PBS, 5 min.
  9. Block in 4% Goat serum/PBS-T, 2 hours at RT.
  10. For Rabbit  anti-SOX9 (AB-5535, Lot # 2167153, Millipore) dilute 1:100, For guinea pig anti-NKX2.1 (G237, Bl. 10/7/11) dilute 1:500, for mouse anti-ACTA2 (α Smooth muscle actin, A5228, Sigma) dilute 1:2000 in blocking buffer. Spin down in µfuge for 10 minutes and incubate on tissue overnight @ 4oC.

Day 2

  1. Rinse slides in PBS-T 3X, 5 min.
  2. Apply secondary antibody, Goat Alexa Fluor 488 anti-rabbit IgG (A11034, Lot# 1298480, for anti–SOX9) 1:200, Goat Alexa Fluor 555 anti-guinea pig IgG (A21435, Lot# 1571699, for anti-NKX2.1) at 1:200, Donkey Alexa Fluor 647 anti-mouse IgG  (A31571, Lot# 1549801, anti-ACTA2) at 1:200, in blocking buffer. Spin down in µfuge for 10 min, apply to tissue and incubated at room temperature for 1 hour.
  3. Rinse in PBS-T 3X, 5 min.
  4. Dilute DAPI 1:2000 and apply to slides for 10 min.
  5. Wash in PBS-T 3X, 5 min.
  6. Rinse slides in 0.1M PB 3X for 5 min.
  7. Add 1 drop of Prolong Gold anti-fade mounting medium (P36930).
  8. Coverslip with Gold Seal Coverslip (Cat# 3422 Electron Microscopy Sciences, 22 X 22 mm).
  9. Allow Prolong Gold to cure overnight at room temp in light sealed box.
  10. Store slides in light sealed box @ 4oC

 

Tissue Used:   

LMM.16.84A.5L.43

PND10 C57BL6

Gender: Male

Weight= 4.5g

Appendix

 

Antigen Retrieval Solution

18ml Solution A- 0.1M Citric Acid (Sigma, C1909) pH 2.5

82ml Reagent B- 0.1M Sodium Citrate (Sigma, S4641 ) pH 8.2

1L dH2O

pH 6.0

By |2018-08-14T19:14:50+00:00April 6th, 2017|Categories: Mus musculus, P10|Tags: , , , , |0 Comments
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Postnatal Day 10 C57BL6 SFTPC, NKX2.1, and ACTA2 Confocal Imaging

Single Cell RNA-Seq and Gene Info

Immunofluorescence- SFTPC, NKX2.1, and ACTA2

 

Purpose:  Immunofluorescence on slides of 7µm frozen sections of C57Bl/6 PND10 lungs for NKX2.1, SFTPC, and ACTA2 with antigen retrieval.

Day 1

  1. For Frozen tissue remove OCT and rehydrate by washing in 2X in PBS, then 5 min in 4% PFA/PBS, then rinse 1X in PBS. Briefly equilibrate slides in Antigen Retrieval Buffer.
  2. Antigen retrieval, pH 6.0 (times will vary according to microwave).
  3. 10 mM sodium citrate, pH 6.0, and heat in a microwave at 96oC. *We usually do a series of three runs (6-7 minutes each run) to equal the time/temp because of evaporation (refill coplin jars with dH2O).
  4. Microwave according to instructions on microwave.
  5. Cool on countertop, 15 min.
  6. Rinse with dH2O
  7. 1X PBS, 5 min.
  8. Block in 4% Goat serum/PBS-T, 2 hours at RT.
  9. For Rabbit anti-SFTPC (RB458, BL 8/24/11, in house) dilute 1:1000, For guinea pig anti-NKX2.1 (G237, Bl. 10/7/11) dilute 1:200, for mouse anti-ACTA2 (α Smooth muscle actin, A5228, Sigma) dilute 1:2000 in blocking buffer. Spin down in µfuge for 10 minutes and incubate on tissue overnight @ 4oC.

Day 2

  1. Rinse slides in PBS-T 3X, 5 min.
  2. Apply secondary antibody, Goat Alexa Fluor 488 anti-rabbit IgG (A11034, Lot# 1298480, for anti-SFTPC), Goat Alexa Fluor 555 anti-guinea pig IgG (A21435, Lot# 1571699, anti-NKX2.1) at 1:200, Donkey Alexa Fluor 647 anti-mouse IgG (A31571, Lot# 1366514, ACTA2) at 1:200, in blocking buffer. Spin down in µfuge for 10 min, apply to tissue and incubated at room temperature for 1 hour.
  1. Spin down in µfuge for 10 min, apply to tissue and incubated at room temperature for 1 hour.
  2. Rinse in PBS-T 3X, 5 min.
  3. Dilute DAPI 1:2000 and apply to slides for 15 min.
  4. Wash in PBS-T 3X, 5 min.
  5. Rinse slides in 0.1M PB or TB, 3X, 5 min.
  6. Add 1 drop of Prolong Gold anti-fade mounting medium (P36930).
  7. Coverslip with Gold Seal Coverslip (Cat# 3422 Electron Microscopy Sciences, 22 X 22 mm).
  8. Allow Prolong Gold to cure overnight at room temp in light sealed box.
  9. Store slides in light sealed box at 4o

 

Tissue Used:   

LMM.16.92A.6L.40

PND10 C57BL6         

Gender: Male

Weight= 4.1g

 

Appendix

 

Antigen Retrieval Solution

18ml Solution A- 0.1M Citric Acid (Sigma, C1909) pH 2.5

82ml Reagent B- 0.1M Sodium Citrate (Sigma, S4641 ) pH 8.2

1L dH2O

pH 6.0

By |2018-08-14T19:14:50+00:00April 6th, 2017|Categories: Mus musculus, P10|Tags: , , , , , , |0 Comments
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Postnatal Day 10 C57BL6 HOPX, AGER, and ACTA2 Confocal Imaging

Postnatal Day 10 C57BL6 HOPX, AGER, and ACTA2 Confocal Imaging

Immunofluorescence-  HOPX, AGER, and ACTA2

 

Purpose:  Stain slides of 7µm frozen sections of C57BL6/J PND10 lungs for HOPX, AGER, and ACTA2 with antigen retrieval.

 

Day 1

  1. For Frozen tissue, rinse 2X in PBS, then 5 min in 4% PFA/PBS, then rinse 1X in PBS.
  2. Briefly equilibrate slides in Antigen Retrieval Buffer.
  3. Antigen retrieval, pH 6.0 (times will vary according to microwave).
  4. 10 mM sodium citrate, pH 6.0, and heat in a microwave at 96 o*We usually do a series of three runs (6-7 minutes each run) to equal the time/temp because of evaporation (refill coplin jars with dH2O).
  5. Microwave according to instructions on microwave.
  6. Cool on countertop, 15 min.
  7. Rinse with dH 2O
  8. 1X PBS, 5 min.
  9. Block in 4% Goat serum/PBS-T, 2 hours at RT.
  10. For rabbit anti- HOPX (SC-30216, Lot # C2212, Santa Cruz) dilute 1:200, For rat anti-AGER ( MAB 1179-500, RND Systems) dilute 1:100, for mouse anti- ACTA2 ( α Smooth muscle actin, A5228, Sigma) dilute 1:2000 in blocking buffer. Spin down in µfuge for 10 minutes and incubate on tissue overnight @ 4oC

Day 2

  1. Rinse slides in PBS-T 3X, 5 min.
  2. Apply secondary antibody, Goat Alexa Fluor 488 anti-rabbit IgG ( A11034, Lot# 1298480, for anti-HOPX),Donkey Alexa Fluor 568 anti-rat IgG ( AB175708 for anti- AGER) at 1:200, Donkey Alexa Fluor 647 anti-mouse IgG (A31571, Lot# 1549801, anti-ACTA2) at 1:200, in blocking buffer. Spin down in µfuge for 10 min, apply to tissue and incubated at room temperature for 1 hour.
  3. Rinse in PBS-T 3X, 5 min.
  4. Dilute DAPI 1:2000 and apply to slides for 10 min.
  5. Wash in PBS-T 3X, 5 min.
  6. Rinse slides in 0.1M PB or TB, 3X, 5 min.
  7. Add 1 drop of Prolong Gold anti-fade mounting medium (P36930).
  8. Coverslip with Gold Seal Coverslip (Cat# 3422 Electron Microscopy Sciences, 22 X 22 mm).
  9. Allow Prolong Gold to cure overnight at room temp in light sealed box.
  10. Store slides in light sealed box @ 4oC

Tissue Used:   

LMM.16.84A.5L.45

PND10 C57BL6

Gender: Male

Weight= 4.5g

 

Appendix

 

Antigen Retrieval Solution

18ml Solution A- 0.1M Citric Acid (Sigma, C1909) pH 2.5

82ml Reagent B- 0.1M Sodium Citrate (Sigma, S4641 ) pH 8.2

1L dH2 O

pH 6.0

Related Experiments

By |2018-09-11T17:05:47+00:00April 5th, 2017|Categories: Mus musculus, P10|Tags: , , , , |0 Comments
Read More

Postnatal Day 10 C57BL6 HOPX, SFTPC, and ACTA2 Confocal Imaging

Postnatal Day 10 C57BL6 HOPX, SFTPC, and ACTA2 Confocal Imaging

Immunofluorescence- HOPX, SFTPC, and ACTA2

 

Purpose: Stain slides of 5µm paraffin sections of C57BL/6J PND10 lungs for HOPX, SFTPC, and ACTA2 with antigen retrieval.

Day 1 

  1. For Frozen tissue remove OCT and rehydrate by washing in 2X in PBS, then 5 min in 4% PFA/PBS, then rinse 1X in PBS. Briefly equilibrate slides in Antigen Retrieval Buffer.
  2. Briefly equilibrate slides in Antigen Retrieval Buffer.
  3. 10 mM sodium citrate, pH 6.0, and heat in a microwave for 15 min at 90oC. *We usually do a series of three runs to equal the time/temp because of evaporation (refill coplin jars with dH2O).
  4. Microwave according to instructions on microwave.
  5. Cool on countertop, 15 min.
  6. Rinse with dH2O
  7. 1X PBS, 5 min.
  8. Block in 4% Donkey serum/PBS-T, 2 hours at RT.
  9. For Rabbit anti-HOPX (SC-30216, Lot # C2212, Santa Cruz) dilute 1:200, For goat anti-SFTPC (SC-7706, Santa Cruz) dilute 1:100, for mouse anti- ACTA2 (A5228, Sigma) dilute 1:2000 in blocking buffer. Spin down in µfuge for 10 min, apply to tissue and incubated O/N @ 4oC.

Day 2

  1. Rinse slides in PBS-T 3X, 5 min.
  2. Apply secondary antibody , Donkey Alexa Fluor 488 anti-rabbit IgG (A21206, Lot# 1387792, for anti-HOPX), Donkey Alexa Fluor 568 anti-goat IgG (A11057, Lot# 1235787, anti- SFTPC) at 1:200, Donkey Alexa Fluor 647 anti-mouse IgG ( A31571, Lot# 1366514, anti- ACTA2) at 1:200, in blocking buffer. Spin down in µfuge for 10 min, apply to tissue and incubated at room temperature for 1 hour.
  3. Spin down in µfuge for 10 min, apply to tissue and incubated at room temperature for 1 hour.
  4. Rinse in PBS-T 3X, 5 min.
  5. Dilute DAPI 1:2000 and apply to slides for 15 min.
  6. Wash in PBS-T 3X, 5 min.
  7. Rinse slides in 0.1M PB or TB, 3X, 5 min.
  8. Add 1 drop of Prolong Gold anti-fade mounting medium (P36930).
  9. Coverslip with Gold Seal Coverslip (Cat# 3422 Electron Microscopy Sciences, 22 X 22 mm).
  10. Allow Prolong Gold to cure overnight at room temp in light sealed box.
  11. Store slides in a light sealed box @ 4oC.

Tissue Used:   

LMM.16.84A.5L.46

PND10 C57BL6

Gender: Male

Weight= 4.5g

 

Appendix

 

Antigen Retrieval Solution

18ml Solution A- 0.1M Citric Acid (Sigma, C1909) pH 2.5

82ml Reagent B- 0.1M Sodium Citrate (Sigma, S4641 ) pH 8.2

1L dH2O

pH 6.0

By |2018-08-14T19:14:51+00:00April 5th, 2017|Categories: Mus musculus, P10|Tags: , , , , |0 Comments
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Postnatal Day 10 C57Bl6 NKX2.1, KI67, and ACTA2 Confocal Imaging

Postnatal Day 10 C57Bl6 NKX2.1, KI67, and ACTA2 Confocal Imaging

Immunofluorescence-NKX2.1, Ki-67 and ACTA2

 

Purpose:  Immunofluorescence on slides of 7µm frozen sections of C57BL/6J PND10 lungs for NKX2.1, Ki-67 and ACTA2 with antigen retrieval.

Day 1

  1. For Frozen tissue, rinse 2X in PBS, then 5 min in 4% PFA/PBS, then rinse 1X in PBS.
  2. Briefly equilibrate slides in Antigen Retrieval Buffer.
  3. Antigen retrieval, pH 6.0 (times will vary according to microwave).
  4. 10 mM sodium citrate, pH 6.0, and heat in a microwave at 96oC. *We usually do a series of three runs (6-7 minutes each run) to equal the time/temp because of evaporation (refill coplin jars with dH2O).
  5. Microwave according to instructions on microwave.
  6. Cool on countertop, 15 min.
  7. Rinse with dH2O
  8. 1X PBS, 5 min.
  9. Block in 4% Goat serum/PBS-T, 2 hours at RT.
  10. For Rabbit anti-NKX2.1 (RB TTF-1 1231, Lot# 0912A) dilute 1:1000, For mouse anti-Ki-67 (55603, BD Biosciences, Lot# 6251774) dilute 1:100, for mouse anti-ACTA2 (α Smooth muscle actin, A5228, Sigma) dilute 1:2000 in blocking buffer. Spin down in µfuge for 10 minutes and incubate on tissue overnight @ 4oC.

Day 2

  1. Rinse slides in PBS-T 3X, 5 min.
  2. Apply secondary antibody, Goat Alexa Fluor 488 anti-rabbit IgG (A11034, Lot# 1298480,  for anti-NKX2.1), Goat Alexa Fluor 568 anti-mouse IgG1 (A21124, Lot# 1600878, for anti-Ki-67) at 1:200, Donkey Alexa Fluor 633 anti-mouse IgG2A (A21136, Lot# 1345055, ACTA2) at 1:200, in blocking buffer. Spin down in µfuge for 10 min, apply to tissue and incubated at room temperature for 1 hour.
  3. Rinse in PBS-T 5X.c
  4. Dilute DAPI 1:2000 and apply to slides for 10 min.
  5. Wash in PBS-T 3X, 5 min.
  6. Rinse slides in 0.1M PB or TB, 3X, 5 min.
  7. Add 1 drop of Prolong Gold anti-fade mounting medium (P36930).
  8. Coverslip with Gold Seal Coverslip (Cat# 3422 Electron Microscopy Sciences, 22 X 22 mm).
  9. Allow Prolong Gold to cure overnight at room temp in light sealed box.
  10. Store in light-sealed box at 4oC.

 

Tissue Used:   

LMM.16.92A.6L.37

PND10 C57BL6          

Gender: Male

Weight= 4.1g

 

Appendix

 

Antigen Retrieval Solution

18ml Solution A- 0.1M Citric Acid (Sigma, C1909) pH 2.5

82ml Reagent B- 0.1M Sodium Citrate (Sigma, S4641 ) pH 8.2

1L dH2O

pH 6.0

Related Experiments

By |2018-09-04T14:44:14+00:00March 23rd, 2017|Categories: Mus musculus, P10|Tags: , , , , |0 Comments
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Postnatal Day 10 C57BL6 SOX9, NKX2.1, and ACTA2 Confocal Imaging

Single Cell RNA-Seq and Gene Info

Immunofluorescence- SOX9, NKX2.1 and ACTA2

 

Purpose:  Immunofluorescence on slides of 7µm frozen sections of C57BL/6  PND10 lungs for SOX9, NKX2.1 and ACTA2 with antigen retrieval.

Day 1

  1. For Frozen tissue, rinse 2X in PBS, then 5 min in 4% PFA/PBS, then rinse 1X in PBS.
  2. Briefly equilibrate slides in Antigen Retrieval Buffer.
  3. Antigen retrieval, pH 6.0 (times will vary according to microwave).
  4. 10 mM sodium citrate, pH 6.0, and heat in a microwave at 96oC. *We usually do a series of three runs (6-7 minutes each run) to equal the time/temp because of evaporation (refill coplin jars with dH2O).
  5. Microwave according to instructions on microwave.
  6. Cool on countertop, 15 min.
  7. Rinse with dH2O
  8. 1X PBS, 5 min.
  9. Block in 4% Goat serum/PBS-T, 2 hours at RT.
  10. For Rabbit  anti-SOX9 (AB-5535, Lot # 2167153, Millipore) dilute 1:100, For guinea pig anti-NKX2.1 (G237, Bl. 10/7/11) dilute 1:500, for mouse anti-ACTA2 (α Smooth muscle actin, A5228, Sigma) dilute 1:2000 in blocking buffer. Spin down in µfuge for 10 minutes and incubate on tissue overnight @ 4oC.

Day 2

  1. Rinse slides in PBS-T 3X, 5 min.
  2. Apply secondary antibody, Goat Alexa Fluor 488 anti-rabbit IgG (A11034, Lot# 1298480, for anti–SOX9) 1:200, Goat Alexa Fluor 555 anti-guinea pig IgG (A21435, Lot# 1571699, for anti-NKX2.1) at 1:200, Donkey Alexa Fluor 647 anti-mouse IgG  (A31571, Lot# 1549801, anti-ACTA2) at 1:200, in blocking buffer. Spin down in µfuge for 10 min, apply to tissue and incubated at room temperature for 1 hour.
  3. Rinse in PBS-T 3X, 5 min.
  4. Dilute DAPI 1:2000 and apply to slides for 10 min.
  5. Wash in PBS-T 3X, 5 min.
  6. Rinse slides in 0.1M PB 3X for 5 min.
  7. Add 1 drop of Prolong Gold anti-fade mounting medium (P36930).
  8. Coverslip with Gold Seal Coverslip (Cat# 3422 Electron Microscopy Sciences, 22 X 22 mm).
  9. Allow Prolong Gold to cure overnight at room temp in light sealed box.
  10. Store slides in light sealed box @ 4oC

 

Tissue Used:    

LMM.16.92A.6L.34

PND10 C57BL6          

Gender: Male

Weight= 4.1g

 

Appendix

 

Antigen Retrieval Solution

18ml Solution A- 0.1M Citric Acid (Sigma, C1909) pH 2.5

82ml Reagent B- 0.1M Sodium Citrate (Sigma, S4641 ) pH 8.2

1L dH2O

pH 6.0

By |2018-08-14T19:14:52+00:00March 22nd, 2017|Categories: Mus musculus, P10|Tags: , , , , |0 Comments
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Postnatal Day 10 C57BL6 ARL13B, EMCN, and ACTA2 Confocal Imaging

Postnatal Day 10 C57BL6 ARL13B, EMCN, and ACTA2 Confocal Imaging

Immunofluorescence-ARL13B, EMCN, and ACTA2

  Purpose:  Immunofluorescence on slides of 7µm frozen sections of C57BL/6J PND10 lungs forARL13B, EMCN, and ACTA2 with antigen retrieval.

Day 1

                      For Frozen tissue, rinse 2X in PBS, then 5 min in 4% PFA/PBS, then rinse 1X in PBS.

Briefly equilibrate slides in Antigen Retrieval Buffer.

    1. Antigen retrieval, pH 6.0 (times will vary according to microwave).
    2. 10 mM sodium citrate, pH 6.0, and heat in a microwave at 96oC. *We usually do a series of three runs (6-7 minutes each run) to equal the time/temp because of evaporation (refill coplin jars with dH2O).
    3. Microwave according to instructions on microwave.
    4. Cool on countertop, 15 min.
    5. Rinse with dH2O
    6. 1X PBS, 5 min.
    7. Block in 4% Donkey serum/PBS-T, 2 hours at RT.
    8. For Rabbit anti-Arl13b (17711-AP,Proteintech) dilute 1:200, For goat anti-EMCN (Endomucin, AF4666, R&D Systems) dilute 1:200, for mouse anti-ACTA2 (α Smooth muscle actin, A5228, Sigma) dilute 1:2000 in blocking buffer. Spin down in µfuge for 10 minutes and incubate on tissue overnight @ 4oC.

    Day 2

    1. Rinse slides in PBS-T 3X, 5 min.
    2. Apply secondary antibody , Donkey Alexa Fluor 488 anti-rabbit IgG (A21206, Lot# 1608521, for anti-Arl13b), Donkey Alexa Fluor 568 anti-goat IgG (A11057, Lot# 1485187, for anti- EMCN) at 1:200, Donkey Alexa Fluor 647 anti-mouse IgG (A31571, Lot# 1549801, ACTA2) at 1:200, in blocking buffer. Spin down in µfuge for 10 min, apply to tissue and incubated at room temperature for 1 hour.
    3. Rinse in PBS-T 3X, 5 min.
    4. Dilute DAPI 1:2000 and apply to slides for 10 min.
    5. Wash in PBS-T 3X, 5 min.
    6. Rinse slides in 0.1M PB or TB, 3X, 5 min.
    7. Add 1 drop of Prolong Gold anti-fade mounting medium (P36930).
    8. Coverslip with Gold Seal Coverslip (Cat# 3422 Electron Microscopy Sciences, 22 X 22 mm).
    9. Allow Prolong Gold to cure overnight at room temp in light sealed box.
    10. Store in light-sealed box @ 4oC.

     

    Tissue Used:    

    LMM.16.92A.6L.54

    PND10 C57BL6          

    Gender: Male

    Weight= 4.1g

     

    Appendix

     Antigen Retrieval Solution

    18ml Solution A- 0.1M Citric Acid (Sigma, C1909) pH 2.5

    82ml Reagent B- 0.1M Sodium Citrate (Sigma, S4641 ) pH 8.2

    1L dH2O

    pH 6.0

 

Related Experiments

By |2018-08-14T19:14:52+00:00March 21st, 2017|Categories: Mus musculus, P10|Tags: , , , , , , |0 Comments
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Postnatal Day 10 C57BL6 SOX2, NKX2.1, and ACTA2 Confocal Imaging

Postnatal Day 10 C57BL6 SOX2, NKX2.1, and ACTA2 Confocal Imaging

Immunofluorescence- SOX2, NKX2.1, and ACTA2

 

Purpose:  Immunofluorescence on slides of 7µm frozen sections of C57BL6 PND10 lungs for SOX2, NKX2.1, and ACTA2 with antigen retrieval.

Day 1

  1. For Frozen tissue, rinse 2X in PBS, then 5 min in 4% PFA/PBS, then rinse 1X in PBS.
  2. Briefly equilibrate slides in Antigen Retrieval Buffer.
  3. Antigen retrieval, pH 6.0 (times will vary according to microwave).
  4. 10 mM sodium citrate, pH 6.0, and heat in a microwave at 96oC. *We usually do a series of three runs (6-7 minutes each run) to equal the time/temp because of evaporation (refill coplin jars with dH2O).
  5. Microwave according to instructions on microwave.
  6. Cool on countertop, 15 min.
  7. Rinse with dH2O
  8. 1X PBS, 5 min.
  9. Block in 4% Goat serum/PBS-T, 2 hours at RT.
  10. For rabbit anti-SOX2 (R1236, BL 5/7/09, Seven Hills) dilute 1:200. For guinea pig anti-NKX2.1 (G237, Bl. 10/7/11) dilute 1:500, for mouse anti-ACTA2 (α Smooth muscle actin, A5228, Sigma) dilute 1:2000 in blocking buffer. Spin down in µfuge for 10 minutes and incubate on tissue overnight @ 4oC.

Day 2

  1. Rinse slides in PBS-T 3X, 5 min.
  2. Apply secondary antibody, Goat Alexa Fluor 488 anti-rabbit IgG (A11034, Lot# 1298480, for anti-SOX2) 1:200, Goat Alexa Fluor 555 anti-guinea pig IgG (A21435, Lot# 1571699, for anti-NKX2.1) at 1:200, Donkey Alexa Fluor 647 anti-mouse IgG  (A31571, Lot# 1549801, anti-ACTA2) at 1:200, in blocking buffer. Spin down in µfuge for 10 min, apply to tissue and incubated at room temperature for 1 hour.
  3. Rinse in PBS-T 3X, 5 min.
  4. Dilute DAPI 1:2000 and apply to slides for 10 min.
  5. Wash in PBS-T 3X, 5 min.
  6. Rinse slides in 0.1M PB 3X for 5 min.
  7. Add 1 drop of Prolong Gold anti-fade mounting medium (P36930).
  8. Coverslip with Gold Seal Coverslip (Cat# 3422 Electron Microscopy Sciences, 22 X 22 mm).
  9. Allow Prolong Gold to cure overnight at room temp in light sealed box.
  1. Store slides in light sealed box @ 4oC

 

Tissue Used:   

LMM.16.92A.6L.54

PND10 C57BL6          

Gender: Male

Weight= 4.1g

 

Appendix

 

Antigen Retrieval Solution

18ml Solution A- 0.1M Citric Acid (Sigma, C1909) pH 2.5

82ml Reagent B- 0.1M Sodium Citrate (Sigma, S4641 ) pH 8.2

1L dH2O

pH 6.0

Related Experiments

By |2018-08-14T19:14:52+00:00March 21st, 2017|Categories: Mus musculus, P10|Tags: , , , , |0 Comments
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Postnatal Day 10 C57Bl6 CSPG4, EMCN, and ACTA2 Confocal Imaging

Postnatal Day 10 C57Bl6 CSPG4, EMCN, and ACTA2 Confocal Imaging

Immunofluorescence- CSPG4, EMCN, and ACTA2

 

Purpose:  Immunofluorescence on slides of 7µm frozen sections of C57BL/6J PND10 lungs for CSPG4, EMCN, and ACTA2 with antigen retrieval.

Day 1

  1. For Frozen tissue, rinse 2X in PBS, then 5 min in 4% PFA/PBS, then rinse 1X in PBS.
  2. Briefly equilibrate slides in Antigen Retrieval Buffer.
  3. Antigen retrieval, pH 6.0 (times will vary according to microwave).
  4. 10 mM sodium citrate, pH 6.0, and heat in a microwave at 96oC. *We usually do a series of three runs (6-7 minutes each run) to equal the time/temp because of evaporation (refill coplin jars with dH2O).
  5. Microwave according to instructions on microwave.
  6. Cool on countertop, 15 min.
  7. Rinse with dH2O
  8. 1X PBS, 5 min.
  9. Block in 4% Donkey serum/PBS-T, 2 hours at RT.
  10. For Rabbit anti-CSPG4 (AB5320, Millipore) dilute 1:100. For goat anti-EMCN (Endomucin, AF4666, R&D Systems) dilute 1:200, for mouse anti-ACTA2 (α Smooth muscle actin, A5228, Sigma) dilute 1:2000 in blocking buffer. Spin down in µfuge for 10 minutes and incubate on tissue overnight @ 4oC.

Day 2

  1. Rinse slides in PBS-T 3X, 5 min.
  2. Apply secondary antibody, Donkey Alexa Fluor 488 anti-rabbit IgG (A21206, Lot# 1387792, for anti-CSPG4) Donkey Alexa Fluor 568 anti-goat IgG (A11057, Lot# 1235787, anti-EMCN) at 1:200, Donkey Alexa Fluor 647 anti-mouse IgG (A31571, Lot# 1549801, anti-ACTA2) at 1:200, in blocking buffer. Spin down in µfuge for 10 min, apply to tissue and incubated at room temperature for 1 hour.
  3. Rinse in PBS-T 3X, 5 min.
  4. Dilute DAPI 1:2000 and apply to slides for 10 min.
  5. Wash in PBS-T 3X, 5 min.
  6. Rinse slides in 0.1M PB 3X for 5 min.
  7. Add 1 drop of Prolong Gold anti-fade mounting medium (P36930).
  8. Coverslip with Gold Seal Coverslip (Cat# 3422 Electron Microscopy Sciences, 22 X 22 mm).
  9. Allow Prolong Gold to cure overnight at room temp in light sealed box.
  10. Store slides in light-sealed box @ 4oC.

 

Tissue Used:   

LMM.16.84A.5L.20

PND10 C57BL6

Gender: Male

Weight= 4.5g

Appendix

 Antigen Retrieval Solution

18ml Solution A- 0.1M Citric Acid (Sigma, C1909) pH 2.5

82ml Reagent B- 0.1M Sodium Citrate (Sigma, S4641 ) pH 8.2

1L dH2O

pH 6.0

Related Experiments

By |2018-08-14T19:14:53+00:00March 20th, 2017|Categories: Mus musculus, P10|Tags: , , , , , |0 Comments
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