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E14.5
E15.5
E16.5
P0
CTCF
H3K27ac
H3K27me3
H3K36me3
H3K4me1
H3K4me2
H3K4me3
H3K9ac
H3K9me3
Development stage:
All E14.5
E15.5
E16.5
P0
Target of assay:
All CTCF
H3K27ac
H3K27me3
H3K36me3
H3K4me1
H3K4me2
H3K4me3
H3K9ac
H3K9me3
Search gene:
Gene: Experiment description: [Find more in ENCODE]
Marker description [ref]:
E14.5 | E15.5 | E16.5 | P0 | |
---|---|---|---|---|
CTCF | Encode | Encode | ||
H3K27ac | Encode | Encode | Encode | Encode |
H3K27me3 | Encode | Encode | Encode | Encode |
H3K36me3 | Encode | Encode | Encode | Encode |
H3K4me1 | Encode | Encode | Encode | Encode |
H3K4me2 | Encode | Encode | Encode | Encode |
H3K4me3 | Encode | Encode | Encode | Encode |
H3K9ac | Encode | Encode | Encode | Encode |
H3K9me3 | Encode | Encode | Encode | Encode |
Marker description [ref]:
Histone modificationor variant | Signal characteristics | Putative functions |
---|---|---|
H2A.Z | Peak | Histone protein variant (H2A.Z) associated with regulatory elements with dynamic chromatin |
H3K4me1 | Peak/region | Mark of regulatory elements associatedwith enhancers and other distal elements,but alsoenricheddownstreamof transcriptionstarts |
H3K4me2 | Peak | Mark of regulatory elements associated with promoters and enhancers |
H3K4me3 | Peak | Mark of regulatory elements primarily associated with promoters/transcription starts |
H3K9ac | Peak | Mark of active regulatory elements with preference for promoters |
H3K9me1 | Region | Preference for the 5' end of genes |
H3K9me3 | Peak/region | Repressive mark associated with constitutive heterochromatin and repetitive elements |
H3K27ac | Peak | Mark of active regulatory elements; may distinguish active enhancers and promoters from their inactive counterparts |
H3K27me3 | Region | Repressive mark established by polycomb complex activity associated with repressive domains and silent developmental genes |
H3K36me3 | Region | Elongation mark associated with transcribed portions of genes, with preference for 3' regions after intron 1 |
H3K79me2 | Region | Transcription-associated mark, with preference for 5' end of genes |
H4K20me1 | Region | Preference for 5' end of genes |